There are two other discrepancies I am hoping you can confirm:
There are two cardstock player boards for placing draw decks, discard piles, etc. These are not listed.
The book lists 18 City discs (10 red, 8 blue). My Kickstarter version has a bag with 9 red and 8 blue city meeples, and a smaller separate bag with a matching red piece (this is the tenth?) and a completely different blue piece. I haven't read all the optional variants, so maybe this is intended to be a differently shaped meeple as well as being the eighth city for blue?
I added an update to the original post to include a reference to those Player Boards. Please refer to the image below for a complete list of the custom wood tokens you should have.